PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022981992.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C2H2
Protein Properties Length: 256aa    MW: 27600.5 Da    PI: 7.9467
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022981992.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2140.0001590112123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ykC+ C+k Fs+   L  H  +H
  XP_022981992.1  90 YKCSVCDKAFSSYQALGGHKASH 112
                     9***********99999998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MALEALNSPT TPSPALHYDD PSLNSLESWS KRKRTKRPRG FDNPPTEEEY LALCLIMLAR  60
GGATASDPDH RLAYEIPIPA QPISVVKLSY KCSVCDKAFS SYQALGGHKA SHRKSATGED  120
HSTSSTITTS ATATTAVGGG KSHECSICHK SFPTGQALGG HKRCHYDGGI GSNNNNNNNH  180
NQTHSHNNNH TVTSSEGVGS THTQSHSHRD FDLNLPALPE LSPGFFNSSG DEEVQSPLPV  240
KKPRILTIPK IEITRT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27730.12e-60C2H2 family protein