PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022982125.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 301aa    MW: 33599.4 Da    PI: 5.737
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022982125.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.92.9e-1999149155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     ++++GVr+++ +g+W+AeIrdp     r  r++lg++ taeeAa  +++a+ +l+g
  XP_022982125.1  99 KKFRGVRQRP-WGKWAAEIRDPL----RrVRIWLGTYNTAEEAAMVYDNAAIQLRG 149
                     59********.**********72....45*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MEGMDLFSSL LVPSVKYSEH RNHTKHFSPP LMAPKLVRIS VTDEDATDSS SDEKEEQHVS  60
RRVKKFITEI TIEALGRRDR KKSTTGKSNL RKPLQPGTKK FRGVRQRPWG KWAAEIRDPL  120
RRVRIWLGTY NTAEEAAMVY DNAAIQLRGP TAQTNFSPPP AVSSSNVSVE ETNDNLSSPT  180
SVLRCPSPST NEKSPETAST GKDTRRAESE IFPDFSFCSN CDSFYPNDIF DFQPPIPSLF  240
GDTALNDAVL RGDYGSSMFI NPDDDFGFGL GFGFRPSTWH MSENSFQDIS DIFGSDPLVA  300
L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23750.18e-52ERF family protein