PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022982162.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family DBB
Protein Properties Length: 252aa    MW: 27661.3 Da    PI: 6.0743
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022982162.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box22.62.2e-07447542
        zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42
                     C+ +e  e++  C  ++  lC  C +++H        H++vpl
  XP_022982162.1  4 QCNVCEMAEATVLCCADEAALCWACDENIHAAnklaskHQRVPL 47
                    7******99*********************66899999999986 PP
2zf-B_box25.92.1e-085294137
        zf-B_box  1 seerkCpeHeekelqlfCedCqqllCedClleeHkg......H 37
                    s++++C+ ++e    +fC +++ l+C++C +++H        H
  XP_022982162.1 52 SQMPRCDICQEASGYIFCLEDRALFCRKCDVAIHTAntcvtgH 94
                    689*******************************554555555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MKIQCNVCEM AEATVLCCAD EAALCWACDE NIHAANKLAS KHQRVPLSGS SSQMPRCDIC  60
QEASGYIFCL EDRALFCRKC DVAIHTANTC VTGHQRFLLT GVKVALEPTD PVPCSSIANS  120
HSREISTKTK VRPPSDKEFS MPSSGELSRS LSVQGGSDDF MTNRTLLTGD SASGGFSQWQ  180
IDELINLTGF NQTCGFMDNG SSKLGCFSPY IHYTTFKIDR DWRETELILR HDTPIVTGHG  240
RVLACYDIIL SS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78600.11e-72DBB family protein