PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022982306.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GATA
Protein Properties Length: 265aa    MW: 28485.4 Da    PI: 8.5132
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022982306.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA63.42.6e-20126160135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C+nC tt+TplWR+gp+g+k+LCnaCG++++k+++
  XP_022982306.1 126 CANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEER 160
                     ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MMHHCGGAGG AASSFSVFLS VPNHGGAAHD MMDIYSNNYA SSSSSSSSSP SSVDCTLSLG  60
TPSTRSSEFD SDKRAAPRHH RHSAGSYVSN FCWDLLHPKH KSAGRSTASN AAAVPSGGDP  120
LLARRCANCD TTSTPLWRNG PRGPKSLCNA CGIRFKKEER RAAATVNCTA TAMAAESNNH  180
HHPHQHHQMF SGNYTNSSAT WVPHHSPVAT QKLPCLSAAA AISNESMFIG NDDVRRTEQE  240
NGISYLSWRL NVTDHRPSLV HDFTR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50870.15e-49GATA family protein