PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022982417.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HD-ZIP

Protein Properties

Length: 181aa MW: 20594.6 Da PI: 9.0796

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022982417.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.2	6.6e-19	76	130	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +ftkeq Lee F+++++ s ++++eLA++l+L rqV vWFqNrRa+ k XP_022982417.1 76 RKKLRFTKEQSANLEESFKEHSTFSPKQKQELARNLKLRARQVEVWFQNRRARTK 130 78999************************************************98 PP
2	HD-ZIP_I/II	113.5	1.3e-36	76	164	1	90
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 +kk+r++keq++ LEesF+e+++ +p++K+elar+L+l++rqv+vWFqnrRARtk+kq+E+d+e +k+++++lkee++rL+ke +eL+ + XP_022982417.1 76 RKKLRFTKEQSANLEESFKEHSTFSPKQKQELARNLKLRARQVEVWFQNRRARTKLKQTEMDCELMKKCCEKLKEETTRLQKELQELK-S 164 69*************************************************************************************9.4 PP

Sequence ? help Back to Top
Protein Sequence Length: 181 aa Download sequence
MAGVKKKKQQ VLKFDDIIMP SLSLGLSIVV ESPNEFIQLS SSGSPVSSFS NSSGYKRERD 60 GCGGEEAEED EDGSPRKKLR FTKEQSANLE ESFKEHSTFS PKQKQELARN LKLRARQVEV 120 WFQNRRARTK LKQTEMDCEL MKKCCEKLKE ETTRLQKELQ ELKSLKLTAP PFATLTVCPS 180 C

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	125	133	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22800.1	1e-28	HD-ZIP family protein