PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022982440.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 530aa MW: 58228.5 Da PI: 6.9188

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022982440.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	51.6	1.7e-16	340	386	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRR+riN+++ L+el+P++ K +Ka++L +A+eY+ksLq XP_022982440.1 340 VHNLSERRRRERINEKMKALQELIPHC-----NKTDKASMLDEAIEYLKSLQ 386 5***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 530 aa Download sequence
MNSCFPDWNF EGDLPPAIHK KSIGHEHEEL VELLWRNGQV VLQSQKCRKP NLISNESGQF 60 QKLNQPVCRS SCGNSSSLIQ EDETVSWIQD PVDDSFEKEF CSNFFSELPL VNPIEIVKQP 120 TKHDGKHPRF GVFDTNSKHP TGLAEFLTNS MPPPKFQCPD STRSNKDLGD LGEMVNSSRV 180 CVPLKGDLGS SNGGRECGNL IQVEGRDCSA MTVGSSHCGS NQVSNPNDLD MSRVSTSGFG 240 NAGLSAGLSQ EDNRKMVPQS GRDKTETMDP TATSSSGGSG SSMDRSRTIG QSTGGNNNKR 300 KGREREESEC QSETAELESA KGNRTAPRSG SSRRTRVAEV HNLSERRRRE RINEKMKALQ 360 ELIPHCNKTD KASMLDEAIE YLKSLQLQLQ VMWMGSGMVP MMFPGVQQYM SRMAMGIGMA 420 QPSMPSIHNS MQLPRVPIVD QSVSVAPMPN QPMICQPQIF NPMNYQNQMQ NPALQEQYAR 480 LMGFHHMQPA SQPINVFKFC PPSVLQSQTV AAPGPAGGPI ANDIVNGNLG

Sequence ? help Back to Top

Protein Sequence Length: 530 aa Download sequence

MNSCFPDWNF EGDLPPAIHK KSIGHEHEEL VELLWRNGQV VLQSQKCRKP NLISNESGQF  60
QKLNQPVCRS SCGNSSSLIQ EDETVSWIQD PVDDSFEKEF CSNFFSELPL VNPIEIVKQP  120
TKHDGKHPRF GVFDTNSKHP TGLAEFLTNS MPPPKFQCPD STRSNKDLGD LGEMVNSSRV  180
CVPLKGDLGS SNGGRECGNL IQVEGRDCSA MTVGSSHCGS NQVSNPNDLD MSRVSTSGFG  240
NAGLSAGLSQ EDNRKMVPQS GRDKTETMDP TATSSSGGSG SSMDRSRTIG QSTGGNNNKR  300
KGREREESEC QSETAELESA KGNRTAPRSG SSRRTRVAEV HNLSERRRRE RINEKMKALQ  360
ELIPHCNKTD KASMLDEAIE YLKSLQLQLQ VMWMGSGMVP MMFPGVQQYM SRMAMGIGMA  420
QPSMPSIHNS MQLPRVPIVD QSVSVAPMPN QPMICQPQIF NPMNYQNQMQ NPALQEQYAR  480
LMGFHHMQPA SQPINVFKFC PPSVLQSQTV AAPGPAGGPI ANDIVNGNLG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	345	350	ERRRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43010.2	3e-64	bHLH family protein