PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022982531.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NF-YB
Protein Properties Length: 232aa    MW: 25461.2 Da    PI: 8.1361
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022982531.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB176.52.6e-5531126297
           NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 
                     +eqdrflPianvsrimkk lP nakisk+aketvqecvsefisf+t+easdkcqrekrktingddllwa++tlGfe+yv +lk+yl+kyre+e+e
  XP_022982531.1  31 KEQDRFLPIANVSRIMKKSLPVNAKISKEAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVSTLKTYLNKYRETEEE 125
                     89*******************************************************************************************98 PP

           NF-YB  97 k 97 
                     k
  XP_022982531.1 126 K 126
                     7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MNGHKRNPTT ATISSPVGSP TSGNISDSST KEQDRFLPIA NVSRIMKKSL PVNAKISKEA  60
KETVQECVSE FISFITGEAS DKCQREKRKT INGDDLLWAM TTLGFENYVS TLKTYLNKYR  120
ETEEEKHSLA RQDDHSPSPA KSTAAVCSAE PIIGGKSANS VMDFQNLNSG FYSLGAHNHN  180
HNHHPGNQKS YHIIDGVGFG ENLRGFNLSA VHENEGNRGR AMAAHLQQSS GW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14540.15e-62NF-YB family protein