PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022982652.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

SBP

Protein Properties

Length: 1001aa MW: 110670 Da PI: 6.1993

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022982652.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	130	8.9e-41	155	232	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqve+C adls+ keyhrrhkvCe+hska+++lv++++qrfCqqCsrfh l+efDe+krsCrrrLa+hn+rrrk ++ XP_022982652.1 155 VCQVEDCGADLSNEKEYHRRHKVCETHSKASNALVANVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKINP 232 6**************************************************************************875 PP

Sequence ? help Back to Top
Protein Sequence Length: 1001 aa Download sequence
MEAGYGGEAC QLYGMSSMDL RAAVGKRSLE WNLNDWKWDG DLFIATPLNT VESDHLNRQL 60 FPIVSGIPLT TGGSSNSSSS CSDEANMGIE KGKREVEKRR RINGIEDENL NDEARSLSLK 120 IGGNVSQIVE RDAGSWEGSS GKKSKLGGGA SNRAVCQVED CGADLSNEKE YHRRHKVCET 180 HSKASNALVA NVMQRFCQQC SRFHVLQEFD EGKRSCRRRL AGHNKRRRKI NPDNVVNGNS 240 PPDEQTSSYL LLTLLRILAN FHSNGSNQTT DQDLLSHLIR TLACQSSEHG GKNLTGILHE 300 PQKLLNNGAL IGKSDLVSTF LSNGPPVPLR SSKQHDTIPI SEAPVQAIGR GGDTPAVSCI 360 KPSTSNSPPA YSEIRDSQVG QCKMMNFDLN DAYVDSDDGM EDIERQALPV HMGTSSLECP 420 SWVQQDSHQS SPPQTSGNSD SASAQSPSSS AGEAQSRTDR IILKLFGKAP NDFPHVLRAQ 480 VLDWLSHSPT EIESYIRPGC VVLTVYTRQT EAAWDDLCHD LSTSFNSLLD VSDDAFWRTG 540 WVYVRVQHQI AFVYQGRVVV DTSLPLRNKN YCRITSVNPV AVSTSKKAIF SVKGRNLTQP 600 TTRLLCAIEG KYLTQEASDE PTERDDNLNA QDDSRCVTFS CSIPVVYGRG FIEVEDDGFS 660 SSFFPFIVAE EDICSEICTL QSALELTETC SNSGETEELE GRSNAMEFIH EIGWLFHRNQ 720 LKSRLGDLDP NENLFSLPRF KWLMEFSMDH DWCAVVKKLL DVLLDGTVDA GGHSSLNLAL 780 MDMSLLHRAV RKNSRSLVEL LLVYPSKVKD TSRADSFLFR PNVVGPAGLT PLHIAAGKDD 840 SEDVLDALTN DPGMVGVEAW KSARDSTGST PEDYARLRGH YSYIRLVQRK INKRSAAEHV 900 VVEIPPSSVS DGRWNEKQNT DMSSSRFEIG RTEVKHCRQC VRKPVRCGTS SSASLVYRPA 960 MLSMVAIAAV CVCVALLFKS SPEVLYVFRP FRWELLDYGT S

Sequence ? help Back to Top

Protein Sequence Length: 1001 aa Download sequence

MEAGYGGEAC QLYGMSSMDL RAAVGKRSLE WNLNDWKWDG DLFIATPLNT VESDHLNRQL  60
FPIVSGIPLT TGGSSNSSSS CSDEANMGIE KGKREVEKRR RINGIEDENL NDEARSLSLK  120
IGGNVSQIVE RDAGSWEGSS GKKSKLGGGA SNRAVCQVED CGADLSNEKE YHRRHKVCET  180
HSKASNALVA NVMQRFCQQC SRFHVLQEFD EGKRSCRRRL AGHNKRRRKI NPDNVVNGNS  240
PPDEQTSSYL LLTLLRILAN FHSNGSNQTT DQDLLSHLIR TLACQSSEHG GKNLTGILHE  300
PQKLLNNGAL IGKSDLVSTF LSNGPPVPLR SSKQHDTIPI SEAPVQAIGR GGDTPAVSCI  360
KPSTSNSPPA YSEIRDSQVG QCKMMNFDLN DAYVDSDDGM EDIERQALPV HMGTSSLECP  420
SWVQQDSHQS SPPQTSGNSD SASAQSPSSS AGEAQSRTDR IILKLFGKAP NDFPHVLRAQ  480
VLDWLSHSPT EIESYIRPGC VVLTVYTRQT EAAWDDLCHD LSTSFNSLLD VSDDAFWRTG  540
WVYVRVQHQI AFVYQGRVVV DTSLPLRNKN YCRITSVNPV AVSTSKKAIF SVKGRNLTQP  600
TTRLLCAIEG KYLTQEASDE PTERDDNLNA QDDSRCVTFS CSIPVVYGRG FIEVEDDGFS  660
SSFFPFIVAE EDICSEICTL QSALELTETC SNSGETEELE GRSNAMEFIH EIGWLFHRNQ  720
LKSRLGDLDP NENLFSLPRF KWLMEFSMDH DWCAVVKKLL DVLLDGTVDA GGHSSLNLAL  780
MDMSLLHRAV RKNSRSLVEL LLVYPSKVKD TSRADSFLFR PNVVGPAGLT PLHIAAGKDD  840
SEDVLDALTN DPGMVGVEAW KSARDSTGST PEDYARLRGH YSYIRLVQRK INKRSAAEHV  900
VVEIPPSSVS DGRWNEKQNT DMSSSRFEIG RTEVKHCRQC VRKPVRCGTS SSASLVYRPA  960
MLSMVAIAAV CVCVALLFKS SPEVLYVFRP FRWELLDYGT S

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	98	102	KRRRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47070.1	0.0	SBP family protein