PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022982951.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

GRF

Protein Properties

Length: 435aa MW: 47230.5 Da PI: 8.1404

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022982951.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	81.7	6.5e-26	164	208	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCsr+v++g+k+CErH+hrgr+rsrk++e+ XP_022982951.1 164 DPEPGRCRRTDGKKWRCSRDVVAGQKYCERHMHRGRNRSRKPVET 208 79****************************************996 PP
2	QLQ	42.6	1.8e-15	92	127	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +F+ aQ ++L+ Q+l+++y++a++ vPpeLl +i+k XP_022982951.1 92 YFSVAQRHELELQALIFRYMLAGVAVPPELLHPIKK 127 79********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 435 aa Download sequence
MDFDLKKCRR QAESEKEEEV EEPQHSAKIC KFFVEQPHRL QQQQPQPSSC SSVLPLFVPG 60 SINDSKASNM LSAFPDSTSS SSSHRLPRTL GYFSVAQRHE LELQALIFRY MLAGVAVPPE 120 LLHPIKKSLL SSTAPLFLHH PLQHFPHYPT SLLQAGYWGR AAMDPEPGRC RRTDGKKWRC 180 SRDVVAGQKY CERHMHRGRN RSRKPVETTT TKPTYTTTTT TTAAAVSSGG GSLCSNANRV 240 VGGGGGRPFS TVESGKYSCV CGQTPSVDLL HLNQGASSDS LPENKNFYES QKEASAGDGK 300 SDGHILRHFF DDWPRSENGD CGSDNSNASQ RMNPTSLSIS VAGNPPSSSS DVSLKLSTGG 360 GSDQGSGDPH LHQNGNIDGE HMHLNWAAGW AATQMASMGG PLAEALRSAN KNSLPTTVLH 420 QLQRTTNSEA NFIST

Sequence ? help Back to Top

Protein Sequence Length: 435 aa Download sequence

MDFDLKKCRR QAESEKEEEV EEPQHSAKIC KFFVEQPHRL QQQQPQPSSC SSVLPLFVPG  60
SINDSKASNM LSAFPDSTSS SSSHRLPRTL GYFSVAQRHE LELQALIFRY MLAGVAVPPE  120
LLHPIKKSLL SSTAPLFLHH PLQHFPHYPT SLLQAGYWGR AAMDPEPGRC RRTDGKKWRC  180
SRDVVAGQKY CERHMHRGRN RSRKPVETTT TKPTYTTTTT TTAAAVSSGG GSLCSNANRV  240
VGGGGGRPFS TVESGKYSCV CGQTPSVDLL HLNQGASSDS LPENKNFYES QKEASAGDGK  300
SDGHILRHFF DDWPRSENGD CGSDNSNASQ RMNPTSLSIS VAGNPPSSSS DVSLKLSTGG  360
GSDQGSGDPH LHQNGNIDGE HMHLNWAAGW AATQMASMGG PLAEALRSAN KNSLPTTVLH  420
QLQRTTNSEA NFIST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52910.1	8e-56	GRF family protein