PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022983256.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GRAS
Protein Properties Length: 547aa    MW: 59867.6 Da    PI: 5.556
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022983256.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS392.16e-1201745321374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     lv+ Ll+cA+avs+++ +la+a+L++++ l+  ++ +++++a yft+AL  r++r     +  l+p e s ++ +++l  +  f+e +P+lkfsh
  XP_022983256.1 174 LVHSLLACADAVSKNNINLAEAILKHIKILVDAQAGAVRKVAGYFTQALTYRIYR-----FYPLKPFECS-SSYTDQL--QIHFYESCPYLKFSH 260
                     689****************************************************.....4456666665.2233333..335************ PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     +taNqaIle++  +  vH+iDf+++qGlQWp+L+qaLa Rp+gpp + +Tg++sp     + l+++g +La+fAe++gv+fef+ +++k++ dle
  XP_022983256.1 261 FTANQAILESIGLSGSVHVIDFNLQQGLQWPPLIQALALRPGGPPAFYLTGISSP---PGDGLQKVGTKLANFAEKFGVKFEFRGFYCKNFGDLE 352
                     ******************************************************5...69*********************************** PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikv 285
                     + +L+++  E++a+n++++lhrll+ ++++++     L ++k l+Pk++++veq a+hn++sF+erf+eal+yys+lfd+le+  ++ s + +  
  XP_022983256.1 353 PFMLDLE-AETVAINSIFELHRLLAYPGAIQK----ALTTIKALNPKIITLVEQVANHNGPSFMERFTEALHYYSSLFDALEEASAAGSLDVVRS 442
                     ****996.6***************99999999....*********************************************88866777666666 PP

            GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrk.vk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     E+  lgr+i+nvv ceg++r+erhet+++W +r++++GF+ ++l+++a kqa++ll+  ++  +gy+vee++gsl+lgW++rpL+++SaW+
  XP_022983256.1 443 EEY-LGRQICNVVGCEGTDRVERHETVAQWLSRMQSSGFEMIHLGSNAFKQANTLLSAlFHgRNGYKVEENNGSLTLGWHTRPLIATSAWT 532
                     655.**************************************************997526689***************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 547 aa     Download sequence    
MKQDNTHQSP NPTAAETKKL AVGDQDEDKL LAALGYNVRS SDMSDVALKI EQLEMVMGLS  60
EHDGISPLSS NTNHYNPSDM SSWIETMIDE LNNPVHAGAE SIPAIATTAA FTDDSEYDLR  120
VIPGISAFPQ LNSTSTRKRY KNSDCESVLV NAPSFSEPSR SVVLVDSAET GVHLVHSLLA  180
CADAVSKNNI NLAEAILKHI KILVDAQAGA VRKVAGYFTQ ALTYRIYRFY PLKPFECSSS  240
YTDQLQIHFY ESCPYLKFSH FTANQAILES IGLSGSVHVI DFNLQQGLQW PPLIQALALR  300
PGGPPAFYLT GISSPPGDGL QKVGTKLANF AEKFGVKFEF RGFYCKNFGD LEPFMLDLEA  360
ETVAINSIFE LHRLLAYPGA IQKALTTIKA LNPKIITLVE QVANHNGPSF MERFTEALHY  420
YSSLFDALEE ASAAGSLDVV RSEEYLGRQI CNVVGCEGTD RVERHETVAQ WLSRMQSSGF  480
EMIHLGSNAF KQANTLLSAL FHGRNGYKVE ENNGSLTLGW HTRPLIATSA WTVPVASGSG  540
TGTGEPK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03450.10.0GRAS family protein