PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022983423.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 211aa MW: 24510.3 Da PI: 8.4972

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022983423.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.6	5.8e-18	7	54	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed ll ++v+++G g+W+++a+ g++Rt+k+c++rw++yl XP_022983423.1 7 KGSWTADEDSLLSHYVTLHGEGHWNSVAHSTGLKRTGKSCRLRWLNYL 54 799*******************************************97 PP
2	Myb_DNA-binding	42.2	1.9e-13	60	103	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T +E++ +++++ ++G++ W++Iar ++ Rt++++k++w++ XP_022983423.1 60 RGNITLQEQLVILQLHSRWGNR-WSKIARFLP-ERTDNEIKNYWRT 103 7899****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 211 aa Download sequence
MANHVKKGSW TADEDSLLSH YVTLHGEGHW NSVAHSTGLK RTGKSCRLRW LNYLRPNVRR 60 GNITLQEQLV ILQLHSRWGN RWSKIARFLP ERTDNEIKNY WRTRVQKQAK QLKCDVNSKR 120 FRDTMRLVWI PRLVERIAAT SGQSLPACTE TSTSTPTISE STWDDNSVNA DTSGWGDGFE 180 AGWWEEDGVE SSFESLWTEE NIRFLQQQLF D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47190.1	2e-74	MYB family protein