PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022983524.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

LBD

Protein Properties

Length: 177aa MW: 19517.6 Da PI: 8.0516

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022983524.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	142.3	1.5e-44	10	109	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +CaaCk+lrrkC +dCv+apyfp e+p+kfanvhk+FGasnv+kll+++++++r+da++sl+yeAear++dPvyG+vg i+ lq+q+ +l++el+ XP_022983524.1 10 PCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPHQRDDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELD 104 7*********************************************************************************************9 PP DUF260 96 llkee 100 +++++ XP_022983524.1 105 ATNAN 109 98765 PP

Sequence ? help Back to Top
Protein Sequence Length: 177 aa Download sequence
MSSSTYSNSP CAACKFLRRK CLPDCVFAPY FPPEEPQKFA NVHKIFGASN VSKLLNEVQP 60 HQRDDAVNSL AYEAEARMKD PVYGCVGAIS ILQRQVIKLQ KELDATNANL IRYACTEIPA 120 PSQSSSSQYA RRSSSTSHDG SSSTSSYGHY YSNPYFSPWS NSHNGSCGDG HDKAEFK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27650.1	5e-69	LBD family protein