PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022983549.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TCP

Protein Properties

Length: 316aa MW: 34099.8 Da PI: 7.4349

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022983549.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	118.6	7.6e-37	68	200	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg........ 88 a+k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLlqqa+p+i++ tgt++++as+ a++ s+s++ s + XP_022983549.1 68 APKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAVTGTGTIPASALAAAAGSVSQQGASLSaglhqkle 162 789******************************************************************99955555555553333335666666 PP TCP 89 .....................................k 89 XP_022983549.1 163 efggggssranwgnlgrphlaatattglwpssvsgfgY 200 77777766666766665555554444444444444431 PP

Sequence ? help Back to Top
Protein Sequence Length: 316 aa Download sequence
MDPKTSSVTK QPQEVETKFL KLPQEQQQEQ RQEQEQEQQS IMGENKPAEI KDFQIAVAEK 60 EEGKKQLAPK RSSNKDRHTK VEGRGRRIRM PALCAARIFQ LTRELGHKSD GETIQWLLQQ 120 AEPSIIAVTG TGTIPASALA AAAGSVSQQG ASLSAGLHQK LEEFGGGGSS RANWGNLGRP 180 HLAATATTGL WPSSVSGFGY QSSTAAAAAA AAQSATNLAN ETSNYFHKLG FPPFDLTSTN 240 MGPMSFTSIL GGNAQQLPGL ELGLSQDGHI GVINPQTLNQ IYQQMGQARV HQHHHQHQQQ 300 QQQQQPPAKD DSQDSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27010.1	8e-72	TCP family protein