PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022983638.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

G2-like

Protein Properties

Length: 374aa MW: 41436.1 Da PI: 8.0651

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022983638.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103.3	1.4e-32	187	240	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt+ LH+rFv+ave+LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ XP_022983638.1 187 PRMRWTTSLHARFVHAVEHLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 240 8****************************************************7 PP
2	Myb_DNA-binding	48.6	1.8e-15	188	239	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ ++v+av+ lGg+ t+k++ + m k +tl ++ks++q+y+ XP_022983638.1 188 RMRWTTSLHARFVHAVEHLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 239 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 374 aa Download sequence
MPLEGVFIEP SSTPLPDLSL QISPPNVSSS SSSSSSSSIR TLSHGFPQTS FDLLIQRNDP 60 RARTELSLGS NNSNSLSGVP LDTPTRPPHL RGLSMFDVSS DGLQPIKGIP VYYNRPFPFL 120 GVDQKDQYFH HQFPSPCFFP NYSNSNGIVQ MGYHHRGIGG NNSSSRFNNG VVSIEAKLPA 180 KRSMRSPRMR WTTSLHARFV HAVEHLGGHE RATPKSVLEL MDVKDLTLAH VKSHLQMYRT 240 VRTTDKPAAS SGQSDGSGED EVSPTLGTTS GDHGPKQFSD QRASPDRSSQ QSPDLEFGSS 300 TLWSNSSRDV WAQTNANEMD VIRPSLYTPM KMQQKCMHQI QECDSGAMKR YSSECNKPSL 360 EFRLGRAEWD VKEH

Sequence ? help Back to Top

Protein Sequence Length: 374 aa Download sequence

MPLEGVFIEP SSTPLPDLSL QISPPNVSSS SSSSSSSSIR TLSHGFPQTS FDLLIQRNDP  60
RARTELSLGS NNSNSLSGVP LDTPTRPPHL RGLSMFDVSS DGLQPIKGIP VYYNRPFPFL  120
GVDQKDQYFH HQFPSPCFFP NYSNSNGIVQ MGYHHRGIGG NNSSSRFNNG VVSIEAKLPA  180
KRSMRSPRMR WTTSLHARFV HAVEHLGGHE RATPKSVLEL MDVKDLTLAH VKSHLQMYRT  240
VRTTDKPAAS SGQSDGSGED EVSPTLGTTS GDHGPKQFSD QRASPDRSSQ QSPDLEFGSS  300
TLWSNSSRDV WAQTNANEMD VIRPSLYTPM KMQQKCMHQI QECDSGAMKR YSSECNKPSL  360
EFRLGRAEWD VKEH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16560.1	4e-58	G2-like family protein