PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022983928.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 312aa    MW: 35223.6 Da    PI: 4.9466
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022983928.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.85.7e-18115162152
             AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkk 52 
                     s+y+GVr++  +g+W+AeIrd + +   r r++lg+++taeeA +a++  r++
  XP_022983928.1 115 SKYRGVRQRA-WGKWAAEIRDpF-K---RSRIWLGTYDTAEEASQAYESRRLQ 162
                     89*****998.**********55.3...5******************876665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MSYSRMPHSN QKLVSRNRKS KLQPKNFSAD SKMRRKVRII FYDPDATDSS SSEDEGERYG  60
RKFNRTVHEI HLPPLKKALE SESSQNSNNE NKNPKLKQSK VQIKNPSSSR RQSSSKYRGV  120
RQRAWGKWAA EIRDPFKRSR IWLGTYDTAE EASQAYESRR LQFEAMAAEM AVEEGNRTAS  180
SSAAVLSEST AETTVSHTSP SSVFEWDDST SQSQDLKVGD SIKEETGTNM NYLQETDQSH  240
PFIDEINMGI NFDSIIADGI GMFLEDFVSL ENTQIFGFGD DEPSGFPNAD FGDFGNDDIS  300
CWLDDSINIT CP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.13e-33ERF family protein