PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022984046.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family TCP
Protein Properties Length: 311aa    MW: 35092.8 Da    PI: 10.1836
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022984046.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP127.11.8e-39761952130
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...ssssaseceaesssssasnsssgkaaks 93 
                      g+kdrhski+T++g+RdRR+Rls+e+a+rfFdLqd+LGfdk+skt+eWL++++  aikel +    +  s+ ++     + ++s          
  XP_022984046.1  76 SGAKDRHSKICTSKGPRDRRMRLSLEIARRFFDLQDMLGFDKASKTVEWLFTKSRSAIKELKEKfllKVHSSGST----LVRNVS---------L 157
                     579*************************************************************66633333222....222222.........2 PP

             TCP  94 aa.kskksqksaasalnlakesrakarararertrekm 130
                        ++ ++ k+  + + ++kesr karararertr k 
  XP_022984046.1 158 YRdQEVPRGKKRRKLRIVDKESRFKARARARERTRAKL 195
                     22133344444444567899***************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MLASSIDNSI QIHDERFQQT IDCYNFNPFL DDQDFIFGHI LYPEIGLGSA NNTNNDTTTA  60
HKASSQDNPI SRKRSSGAKD RHSKICTSKG PRDRRMRLSL EIARRFFDLQ DMLGFDKASK  120
TVEWLFTKSR SAIKELKEKF LLKVHSSGST LVRNVSLYRD QEVPRGKKRR KLRIVDKESR  180
FKARARARER TRAKLIRGRF EISKSNFEVN PVGVCKMEDV IEESSTKSKS VANFPQNLGS  240
KAKNSASLIS NHCYDKRVSK ESCSGEIHLL PGSGSSMDMG TLSLDTMRAS PAGLKLSELD  300
EVDGVLIFYG E
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1167171KKRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68800.11e-31TCP family protein