PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022984247.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family LBD
Protein Properties Length: 239aa    MW: 26557 Da    PI: 8.7347
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022984247.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260132.41.9e-41491481100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +CaaCk+lrr+Ca++C++apyf  ++p+kfa vhk+FGasnv+k+l +++e++r da++slvyeA++r+rdPvyG++g i++lq+q++ l+ el+
  XP_022984247.1  49 PCAACKLLRRRCAQECPFAPYFSPHEPHKFASVHKVFGASNVSKMLMEVSENHRADAANSLVYEANVRLRDPVYGCMGAISSLQHQIQALQIELN 143
                     7********************************************************************************************** PP

          DUF260  96 llkee 100
                     ++++e
  XP_022984247.1 144 AVRAE 148
                     99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
MSKERERFEE IAKKIKRETD VSSNIPPQQI MGRRHSLQAP PGILNTITPC AACKLLRRRC  60
AQECPFAPYF SPHEPHKFAS VHKVFGASNV SKMLMEVSEN HRADAANSLV YEANVRLRDP  120
VYGCMGAISS LQHQIQALQI ELNAVRAEIL RHKFREASNM IHSSPQPQQQ QHVSFLSSSA  180
EVVSVAVPPP PPSLPHNASS SSSPLYNRPT VATDYNTISS NENVTYFVST TSTDHQLNS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40470.15e-83LBD family protein