PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022984456.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 503aa MW: 55857.6 Da PI: 6.9042

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022984456.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	88.6	5.1e-28	270	331	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 ldDg++WrKYGqK + g++ pr+YYrCt++ gC ++k+v++s++dp+v+eitY+g+H ++ XP_022984456.1 270 LDDGFCWRKYGQKGILGAKLPRGYYRCTHRnlqGCLATKQVQQSDHDPNVFEITYRGTHSCT 331 59*************************99999***********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 503 aa Download sequence
MDDASDRHVV LVGFGASTFM GPNFGCVLEE SGIGQESEMI SEINFQAMYR RPKTGPFSFF 60 KNYSPSFLWF QKSFSALFIN THTIPFLLHQ TSPPTSCLCF LTQSCLVSAL NPKFCFVLFC 120 FVLLSCSPNF RTLIMDSFGE WDQKKKLKKE LLKGKELAKQ LQIHLNVRPS SSSMAAAASS 180 SSSSVSNDGS ELLVQKILSS YEKALSLLSS NGIQISESPS SLNGSPRSED SDREFKDHDH 240 TNASSRTRNI LPTWTQKFQV SPGMALEGSL DDGFCWRKYG QKGILGAKLP RGYYRCTHRN 300 LQGCLATKQV QQSDHDPNVF EITYRGTHSC TQVIPSASTE FQQQNHPLLP DQRVQNQQTS 360 PDALLSSWPS LRVITENLDK THDPTLFHPF NYDPTSNYEA DRVESGSTLR ANVNFSKFSP 420 PPFLSPPTSG SGLSYFSASS SGLSEGFIGH HQKLDLQPNK SEFSEIFSSP TSASNSATPG 480 LDFPFGELQM EPTFTFHNTN FFS

Sequence ? help Back to Top

Protein Sequence Length: 503 aa Download sequence

MDDASDRHVV LVGFGASTFM GPNFGCVLEE SGIGQESEMI SEINFQAMYR RPKTGPFSFF  60
KNYSPSFLWF QKSFSALFIN THTIPFLLHQ TSPPTSCLCF LTQSCLVSAL NPKFCFVLFC  120
FVLLSCSPNF RTLIMDSFGE WDQKKKLKKE LLKGKELAKQ LQIHLNVRPS SSSMAAAASS  180
SSSSVSNDGS ELLVQKILSS YEKALSLLSS NGIQISESPS SLNGSPRSED SDREFKDHDH  240
TNASSRTRNI LPTWTQKFQV SPGMALEGSL DDGFCWRKYG QKGILGAKLP RGYYRCTHRN  300
LQGCLATKQV QQSDHDPNVF EITYRGTHSC TQVIPSASTE FQQQNHPLLP DQRVQNQQTS  360
PDALLSSWPS LRVITENLDK THDPTLFHPF NYDPTSNYEA DRVESGSTLR ANVNFSKFSP  420
PPFLSPPTSG SGLSYFSASS SGLSEGFIGH HQKLDLQPNK SEFSEIFSSP TSASNSATPG  480
LDFPFGELQM EPTFTFHNTN FFS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G23810.1	2e-47	WRKY family protein