PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022984770.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

SRS

Protein Properties

Length: 254aa MW: 27096 Da PI: 7.0312

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022984770.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	102.1	1e-31	73	136	4	67
DUF702 4 gtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa 67 + +sCqdCGnqakkdC+h+RCRtCCksrgf C+thvkstWvpa+krrer ++ sk+ +++ XP_022984770.1 73 KVISCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWVPASKRRERLISTTGGDSKRPRDT 136 5589*********************************************888877776666555 PP
2	DUF702	80.4	4.9e-25	137	200	94	155
DUF702 94 aeskkeletsslPeevsseavfrcvrvssvdd..geeelaYqtavsigGhvfkGiLydqGleek 155 + +++ +e+ ++P+e++s+avfrcvr++++d+ g +++aYqtav+igGh+fkGiL+d+G++++ XP_022984770.1 137 HATSSGFEIGNFPAEINSTAVFRCVRMTTLDEptGTDQYAYQTAVNIGGHIFKGILHDHGPDQQ 200 45667889999*******************9899***********************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 254 aa Download sequence
MAGFFPLGGG GGGSSGGEII HPTDGLLWYK NYESFETEQQ QQGGERFGYS GENSPARSSL 60 VMVRSGGDGG GGKVISCQDC GNQAKKDCVH MRCRTCCKSR GFLCETHVKS TWVPASKRRE 120 RLISTTGGDS KRPRDTHATS SGFEIGNFPA EINSTAVFRC VRMTTLDEPT GTDQYAYQTA 180 VNIGGHIFKG ILHDHGPDQQ QHHHNPPISA SPDGGALLIT TADSAALLDP PPSYPAPLSS 240 YITAGTQFFQ PPTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G51060.1	2e-49	SRS family protein