PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022984932.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HD-ZIP
Protein Properties Length: 257aa    MW: 29518.6 Da    PI: 6.5253
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022984932.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.55.6e-193892356
                    --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox  3 kRttftkeqleeLeelFek.nrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                    ++++f++eq++ Le+ F++ +++++ +++ +LA++lgL+ rq+ +WFqNrR ++k
  XP_022984932.1 38 NKRRFSDEQIRSLESIFYSsDSKLDSRKKVQLATELGLQPRQIAIWFQNRRVRWK 92
                    5679**************98**********************************9 PP
2HD-ZIP_I/II110.98.4e-3638130293
     HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeee.kLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                     +krr+s+eq+++LE+ F +++ kL++++Kv+la+eLglqprq+a+WFqnrR R+k+k++E+++++L+++yd+l+++ ++L++e+++L ++l++
  XP_022984932.1  38 NKRRFSDEQIRSLESIFYSSDsKLDSRKKVQLATELGLQPRQIAIWFQNRRVRWKSKEMENNFRSLRANYDNLASQFKTLQEEKNSLLSQLQK 130
                     79***************88777********************************************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MERQEYFILP NFETAAVASS QICSTPRRRR KKKTNNTNKR RFSDEQIRSL ESIFYSSDSK  60
LDSRKKVQLA TELGLQPRQI AIWFQNRRVR WKSKEMENNF RSLRANYDNL ASQFKTLQEE  120
KNSLLSQLQK LSELVQEGPR EGHYSNEIAK TIYETKEKPQ SFHDELGQSG VTYLSNNYNT  180
DKRGTENGEG DRGLEMTHSS EGISNDISHA VEQACQLLNP NGSFESSENW CGFDSDGGGI  240
IFECQPCSSL QELSFWG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12733RRRRKKK
22741RRRRKKKTNNTNKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46680.22e-31HD-ZIP family protein