PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022985230.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 383aa    MW: 42194.4 Da    PI: 6.3544
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022985230.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH185.2e-062833211154
                     HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      R +++ +++  L++l+ +      +K + a++L +A+eYIk L
  XP_022985230.1 283 VRKEKMGDRITALQQLVSPF-----GKTDTASVLSEAIEYIKFL 321
                     5778999**********998.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 383 aa     Download sequence    
MAEEFQSSGN WWEASRSRYE AEISPSSSAA AADPNLHITG LALDWNQPLF RGGGEKAAEG  60
SFRSMLQPDN MNLNMLQETE QQQQQQQIQW MRSEKGINRG FSLDHHHHQQ QQFTSPSHYS  120
SSDSAVTSFP IDTTTAAATL YGNSTTLLQG LLGGEQQQVS AAAGMNFPYN SHYGINSNEF  180
MSAGASWSPS TKLPQFLRNS TPHSQLQFSN NTAFWNASDM KDVRPSYVPT SYNTIPEKPK  240
NSSEIGDSVS VGKKSGNDGN QQQSGGGKRG RNESPSALPA FKVRKEKMGD RITALQQLVS  300
PFGKTDTASV LSEAIEYIKF LHEQVGVLST PYLKSRSDKW KEGEGEEDLR SRGLCLVPVS  360
STFPVTHDTT VDFWTPTFGG TFR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20640.18e-52bHLH family protein