PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022985261.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 234aa    MW: 25774.5 Da    PI: 7.268
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022985261.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.76.5e-1179126454
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++  rE+ RRdr+N++f eL  +l +    + +K +Ka+iL  Av+ + +L
  XP_022985261.1  79 SKACREKLRRDRLNDKFLELGAILEPG---RPPKTDKAAILIDAVRIVAQL 126
                     6789**********************8...89*************999888 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MVSPETTNWL FDYALMDDIP VADANFSAPT AGFSWSMPPL NASSNVSTEI EGSLFESDGL  60
KEPGSKKRVR TETSCASSSK ACREKLRRDR LNDKFLELGA ILEPGRPPKT DKAAILIDAV  120
RIVAQLRGEA KMLKDSNTSL SEKIKELKAE KNELRDEKQR LKMEKEKLEQ QLKDMNSQPG  180
FLPPAIPATF AAQGQAAGNK LVPFISYPGV AMWQFMPPAA VDTSQDHVLR PPVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.11e-97bHLH family protein