PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022985351.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family B3
Protein Properties Length: 324aa    MW: 35863.9 Da    PI: 6.9911
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022985351.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B393.61.4e-2933134199
                     EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 
                     f+kv tpsdv+k++rlv+pk++ae++    ++++e++  l++ed+ g+ W+++++y+ +s++yv+tkGW++Fvk+++L++gD+v F++ g  + +
  XP_022985351.1  33 FDKVVTPSDVGKLNRLVIPKQHAEKFfpldSSSNEKGLLLSFEDRCGKLWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQR-GVCKDR 126
                     89****************************66677899*************************************************4.337777 PP

                     .EEEEE-S CS
              B3  92 lvvkvfrk 99 
                     +++ ++++
  XP_022985351.1 127 FFIDWRSR 134
                     79999886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MDFGSSSRFH HQHQEIMEES SNSGVYIEKE HMFDKVVTPS DVGKLNRLVI PKQHAEKFFP  60
LDSSSNEKGL LLSFEDRCGK LWRFRYSYWT SSQSYVMTKG WSRFVKEKRL DAGDIVSFQR  120
GVCKDRFFID WRSRPPRTPV ETAFHHHGGG GYGGYGGGGG GGQFPPHQFQ LHGQWNPVAT  180
PLSLHRDHAF HLQQNNSVHN NVSLFHTTYN HQPIGGGGCD GGASVFFQLR SPAALPGVDD  240
GGHGIGKAAA AKTLRLFGVN MECVVSEDSD DDEGDKVTTS TSTTLSSQFC VYDGMPMSMS  300
MPTSNPNIPI TDFFEKGKSL DFGT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01030.17e-60B3 family protein