PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022985410.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 353aa MW: 39470.5 Da PI: 6.1454

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022985410.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	89.9	2.1e-28	131	191	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK++ g++fprsYYrCt++ +C++ k+v+rs+ed +v++itY+g+H+++ XP_022985410.1 131 EDGYSWRKYGQKDILGATFPRSYYRCTFRntqNCWAIKQVQRSDEDHSVFDITYRGKHTCS 191 8************************998889************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence
MESGWSWDQK SLIGELIQGM ELTKQLKAEL SSASAEESRG SLVHGIISSY EKALSILKWN 60 GPMSQPQMVE AAFALPGSPI SVNGSLSSDD SGKGLKDPQD PRKESKKRKT QPRWTEQVKV 120 NSETGFDGPH EDGYSWRKYG QKDILGATFP RSYYRCTFRN TQNCWAIKQV QRSDEDHSVF 180 DITYRGKHTC SQGNYLAQSC HSPKIQEKKE NDHDHHQLQL SQENLFSNQT IENIEKLESK 240 ASSFCFGSTS AGCKDIVNGG FSHLAIDTHS ALGSYTQPFI SPTTADSNYF TPSPCHRSDV 300 GGAHNVQHPE PDVHEIFSAN SSATKSPILD WDFPFDSEQI NPNFPFNSPE FFY

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence

MESGWSWDQK SLIGELIQGM ELTKQLKAEL SSASAEESRG SLVHGIISSY EKALSILKWN  60
GPMSQPQMVE AAFALPGSPI SVNGSLSSDD SGKGLKDPQD PRKESKKRKT QPRWTEQVKV  120
NSETGFDGPH EDGYSWRKYG QKDILGATFP RSYYRCTFRN TQNCWAIKQV QRSDEDHSVF  180
DITYRGKHTC SQGNYLAQSC HSPKIQEKKE NDHDHHQLQL SQENLFSNQT IENIEKLESK  240
ASSFCFGSTS AGCKDIVNGG FSHLAIDTHS ALGSYTQPFI SPTTADSNYF TPSPCHRSDV  300
GGAHNVQHPE PDVHEIFSAN SSATKSPILD WDFPFDSEQI NPNFPFNSPE FFY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	101	109	PRKESKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G11070.1	3e-55	WRKY family protein