PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022985411.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family WRKY
Protein Properties Length: 227aa    MW: 25796.9 Da    PI: 8.4691
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022985411.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY90.99.9e-29131191259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dgy+WrKYGqK++ g++fprsYYrCt++   +C++ k+v+rs+ed +v++itY+g+H+++
  XP_022985411.1 131 EDGYSWRKYGQKDILGATFPRSYYRCTFRntqNCWAIKQVQRSDEDHSVFDITYRGKHTCS 191
                     8**************************998889**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MESGWSWDQK SLIGELIQGM ELTKQLKAEL SSASAEESRG SLVHGIISSY EKALSILKWN  60
GPMSQPQMVE AAFALPGSPI SVNGSLSSDD SGKGLKDPQD PRKESKKRKT QPRWTEQVKV  120
NSETGFDGPH EDGYSWRKYG QKDILGATFP RSYYRCTFRN TQNCWAIKQV QRSDEDHSVF  180
DITYRGKHTC SQGNYLAQSC HSPKIQEKKE NDHDHHQLLL RLNFCRM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1101109PRKESKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.11e-54WRKY family protein