PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022985491.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 360aa MW: 39005.2 Da PI: 10.4477

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022985491.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	45.5	1.8e-14	121	166	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++WT+eE+ ++ + k+lG+g+W+ I++ + ++Rt+ q+ s+ qky XP_022985491.1 121 KPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKY 166 58*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MVRESPRKCS HCGLNGHNSR TCSNFLKGNN NYSNSSYYCV KLFGVNLMEN RDESMRKSLS 60 MGNLNLHSCN NVLDLNTAAA VAAVNNVADD NSASADNAGY LSDGFIHNKR RKAAHERKKG 120 KPWTEEEHRT FLAGLKKLGK GDWRGISKNF VTTRTPTQVA SHAQKYFLRK MHANEKKKRR 180 ASLFDMPEIK NNVPQDCQAS GETSLPKNNN SENQRQVNNL PAQLINRFPH LCLDAPHFVP 240 PATGSAASAA ANLHGIPYVV GVSPNVPILP LVNIGRGGGV MAMPKSPRSP NAPMAGHPSG 300 IPPSPRTSPS RPILQQLQPS AIAVAASNFE ADALELKIGL PQSPQPQNLS SQTSGAIRVI

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MVRESPRKCS HCGLNGHNSR TCSNFLKGNN NYSNSSYYCV KLFGVNLMEN RDESMRKSLS  60
MGNLNLHSCN NVLDLNTAAA VAAVNNVADD NSASADNAGY LSDGFIHNKR RKAAHERKKG  120
KPWTEEEHRT FLAGLKKLGK GDWRGISKNF VTTRTPTQVA SHAQKYFLRK MHANEKKKRR  180
ASLFDMPEIK NNVPQDCQAS GETSLPKNNN SENQRQVNNL PAQLINRFPH LCLDAPHFVP  240
PATGSAASAA ANLHGIPYVV GVSPNVPILP LVNIGRGGGV MAMPKSPRSP NAPMAGHPSG  300
IPPSPRTSPS RPILQQLQPS AIAVAASNFE ADALELKIGL PQSPQPQNLS SQTSGAIRVI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	176	180	KKKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61620.1	1e-54	MYB_related family protein