PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022985725.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NF-YB
Protein Properties Length: 203aa    MW: 20912.1 Da    PI: 6.3589
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022985725.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB185.44.4e-5822117297
           NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 
                     +eqdrflPianvsrimkk+lPanakiskdaketvqecvsefisf+t+easdkcqrekrktingddllwa++tlGfe+yveplk+yl+kyrelege
  XP_022985725.1  22 KEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYRELEGE 116
                     89********************************************************************************************9 PP

           NF-YB  97 k 97 
                     k
  XP_022985725.1 117 K 117
                     7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MAESDNESGG HNSNANSELS AKEQDRFLPI ANVSRIMKKA LPANAKISKD AKETVQECVS  60
EFISFITGEA SDKCQREKRK TINGDDLLWA MTTLGFEEYV EPLKTYLQKY RELEGEKSTM  120
VRQGEKDGSG GGGPGGSGAS GGGGGVNSST GGGGVGGGGF NGVGGMYGGM MMMGHHQGGV  180
YGSSGGYHHM GIGGGKEGNS GSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14540.11e-76NF-YB family protein