PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022985849.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GATA
Protein Properties Length: 264aa    MW: 29515.6 Da    PI: 8.8469
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022985849.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA56.15.1e-18216250133
            GATA   1 Cs..nCgttkTplWRrgpdgnktLCnaCGlyyrkk 33 
                     C+  nC+t  Tp+WR+gp g+k+LCnaCG++yrk+
  XP_022985849.1 216 CTnyNCNTNFTPMWRKGPLGPKSLCNACGIRYRKE 250
                     55559****************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MEPHIWRQMS QMKTHEYDHH RFHSESQVDL TLRLGFPNGN DNGNANANAN ANANANANAN  60
ANAGERPDID HSKPLFSAPL HSINHHALQP HQVMVNNNHG LASSGGRNGE MMSEANYNPH  120
QIVWSKELKT YVLKSNNFGQ LHPSLYCNTY PAKTVGSTAN STANLPLQNY NNDQYTLLNP  180
ACRKADDHEA EASSGSRRRG LQRRRVSACN EVERRCTNYN CNTNFTPMWR KGPLGPKSLC  240
NACGIRYRKE IMNKEAVAAE NNHG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20750.15e-16GATA family protein