PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022985888.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family YABBY
Protein Properties Length: 190aa    MW: 21500.9 Da    PI: 8.3274
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022985888.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY174.75.9e-5431602165
           YABBY   2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakas.qllaaeshldeslkeelleelkveeenlksnvekeesasts 95 
                     ++f+ +e++CyvqC+ C+til+vsvP +sl++ vtv CGhC+sllsvn+  a+   l   s l+++l +e   e+    ++ k  ++  +s+ + 
  XP_022985888.1   3 HLFELPEKICYVQCGICTTILLVSVPCSSLSMEVTVTCGHCSSLLSVNMLRATlVPLHFLSSLSRNLPKETCREM----SSGKLFDSFIRSNLKF 93 
                     78999*****************************************99876652223344444444443333333....3333333222222222 PP

           YABBY  96 vsseklsenedeevprvpp.virPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPk 165
                      s ++    e+  +p +pp v++PPekrqrvPsayn+fik+ei+r+ka+nP+++h+eaf +aaknWa fP+
  XP_022985888.1  94 -SEYE---VEEGLIPVTPPsVNKPPEKRQRVPSAYNCFIKDEIRRLKAENPQMTHKEAFRTAAKNWANFPP 160
                     .2222...233345555555*************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MNHLFELPEK ICYVQCGICT TILLVSVPCS SLSMEVTVTC GHCSSLLSVN MLRATLVPLH  60
FLSSLSRNLP KETCREMSSG KLFDSFIRSN LKFSEYEVEE GLIPVTPPSV NKPPEKRQRV  120
PSAYNCFIKD EIRRLKAENP QMTHKEAFRT AAKNWANFPP TIQQKEDPQN TQIPEVEKNG  180
KCFPRPSVLT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G23420.11e-55YABBY family protein