PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022986059.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NF-YC
Protein Properties Length: 228aa    MW: 25969 Da    PI: 9.2559
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022986059.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC47.15.3e-15119210899
           NF-YC   8 kqiekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprd 99 
                     ++ e++++ k  ++P+ rikki++ ++   +i  ea  l+ ka e+f++++   ++  + + ++++l    ++++v + + +dfl d vp++
  XP_022986059.1 119 EEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVPEK 210
                     457788888999************9999999**********************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MASSKKSSSE AKSKEAGTSK PAPKNKTHNN NNNNNNNARK VDKVYSKKKK VSSNNNKHTS  60
NGSVKENEVL PISAPGDAEE DRVETTSKSP NTSKSKKVKR NHGKKEENGY AEEEEEEEEE  120
AEEEAEEKIY KFPMNRIKKI MRDENSDLRI NQEALFLVNK ATEMFLVQFC KDAYACCAQD  180
RKKSLAYKHL SSVVCKRKRY DFLSDFVPEK LKFEDALKER SMAESGKD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1181199RKKSLAYKHLSSVVCKRKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07980.16e-34NF-YC family protein