PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022986060.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NF-YC
Protein Properties Length: 190aa    MW: 21546.9 Da    PI: 9.288
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022986060.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC29.31.8e-09119181870
           NF-YC   8 kqiekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenk 70 
                     ++ e++++ k  ++P+ rikki++ ++   +i  ea  l+ ka e+f++++   ++  + + +
  XP_022986060.1 119 EEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDR 181
                     457788888999************9999999******************99877776555544 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MASSKKSSSE AKSKEAGTSK PAPKNKTHNN NNNNNNNARK VDKVYSKKKK VSSNNNKHTS  60
NGSVKENEVL PISAPGDAEE DRVETTSKSP NTSKSKKVKR NHGKKEENGY AEEEEEEEEE  120
AEEEAEEKIY KFPMNRIKKI MRDENSDLRI NQEALFLVNK ATEMFLVQFC KDAYACCAQD  180
RKKSLAYKHL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07980.15e-20NF-YC family protein