PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022986071.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 323aa MW: 37164.2 Da PI: 4.5948

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022986071.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.4	1e-15	16	63	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W++ Ed++l++ ++ +G ++W++ ++ g+ R++k+c++rw +yl XP_022986071.1 16 RGPWSPAEDLRLINFIQNYGHDNWRALPKQAGLLRCGKSCRLRWINYL 63 89****************************99**********97 PP
2	Myb_DNA-binding	53.2	6.9e-17	69	114	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T++E+e +++++k +G++ W++Ia++++ gRt++++k+ w+++l XP_022986071.1 69 RGNFTQDEEETIIKLHKTWGNK-WSKIASRLP-GRTDNEIKNVWNTHL 114 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 323 aa Download sequence
MGKGRAPCCD KNQVKRGPWS PAEDLRLINF IQNYGHDNWR ALPKQAGLLR CGKSCRLRWI 60 NYLRPDVKRG NFTQDEEETI IKLHKTWGNK WSKIASRLPG RTDNEIKNVW NTHLKKRLLN 120 TATTKDCNEP KESLTTSSSS SSSLRLSNET QDLETEQPNK TNYVTSDLFC PEQQTTSSLS 180 SNPSNSNSSS QVDKVWPQNH LDFGEEVEKK KENKQIRSEL ELELELESIE IPLEWDKDFW 240 NILDLEDIDL FGSNEVDQYY CQASNFGEEK RQEFENDKWF KYLENELGLE ADGCSGADDV 300 TAAERLLMDD VDPCMAYFAD GLT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79180.1	3e-76	MYB family protein