PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022986192.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 237aa MW: 26178.3 Da PI: 6.306

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022986192.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.5	0.00095	95	114	2	21
EETTTTEEESSHHHHHHHHH CS zf-C2H2 2 kCpdCgksFsrksnLkrHir 21 +C+ Cgk+F ++ L H+r XP_022986192.1 95 PCTECGKTFWSWKALFGHMR 114 5******************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
MEEEPTKTTP SPSFYSFTSN SLPIMDSPSR SLFPFNVFPP PSPSHSSLPA PNSRRKRTKF 60 IKPTAAAAVP LHSPSTPKSK HAKKPDPTAP KITRPCTECG KTFWSWKALF GHMRCHPERQ 120 WRGINPPPNF RRSTATDEDH EIAACLIMLA NGPNAIDPTE AVTETDDDCR ENQESTAAAA 180 AALVFGQRGS RKNVKEEEDD DDHGYLDLNL PPPMEDIEEH SSSYCSGIVL DLRLGPN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	54	80	RRKRTKFIKPTAAAAVPLHSPSTPKSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35280.1	4e-41	C2H2 family protein