PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022986201.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 232aa MW: 26918.9 Da PI: 4.6407

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022986201.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.4	3.4e-18	19	66	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEde+l +v+++G+ +W++I++ g+ R++k+c++rw +yl XP_022986201.1 19 KGKWSKEEDEKLRAYVTKYGSWNWRLIPKFAGLSRCGKSCRLRWMNYL 66 79********************************************97 PP
2	Myb_DNA-binding	50.8	3.7e-16	72	116	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++ +eEd+ ++++ + lG++ W++Ia +++ gRt++++k++w++ XP_022986201.1 72 RGNFQKEEDQTILRLQATLGNR-WSAIATYLP-GRTDNEIKNHWHTN 116 899*****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 232 aa Download sequence
MEEEGDERER ENGENGRKKG KWSKEEDEKL RAYVTKYGSW NWRLIPKFAG LSRCGKSCRL 60 RWMNYLRPDI KRGNFQKEED QTILRLQATL GNRWSAIATY LPGRTDNEIK NHWHTNLKKL 120 LDQNPSNTEV EDAAASSCSE LRIREEEEEL DETLIVLNSE MATPELAAKH EGMNFGETET 180 WVVGLNAEHS MEVGGNLWTD PFVFEDPLSL DNNPTHVPMD LFEHYEMFPP SN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31180.1	2e-47	MYB family protein