PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022986225.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 596aa MW: 67291 Da PI: 10.3418

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022986225.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.5	1.3e-07	11	63	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.......TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg.......kgRtlkqcksrwqkyl 48 +W t d+ll+ av+++G+ +W+++a ++ +t+ +c++++++++ XP_022986225.1 11 PWGTLGDLLLASAVNRHGTASWDSVAMELHnrfsqspSSLTPQDCRNKFYDLK 63 67777799***************************99*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 596 aa Download sequence
MVMQRQTNPK PWGTLGDLLL ASAVNRHGTA SWDSVAMELH NRFSQSPSSL TPQDCRNKFY 60 DLKRRFLSQN LHDSDSSSLL PMLDELRKIR VEELRRDVQR RDALIVSLEM KVKRLEEERD 120 PSFHEPHGGP DPDADADAVK TNLRPQNPTA SEDDSDNRKN IRSPNESNST SKKYEVRQNG 180 VVQENQIPES VKISKITGTG PPRTGDKPGK EWSFNGAAGE PEPEREKNSV AGGGYKERNW 240 RSSRRSQTAV GDSNEAWESV SESKQEGRDG AVSKQQSSDV QSSGSLSQRK RCRNSSGEEP 300 EVSPAKPKPK PKPKPSAVKS EALLKFLEII RSHRLGSAFE RRVRSQESDR YINLIRQHID 360 LRTIRARVVK GAYADSFHLF FRDLLLLFNN AIIFFHTTSP ENDAAVKLRA LVLEEMNDKA 420 RKPQPTVAKS KPTKPCTTAM VGCRKSDSVA AVWDVGGKKA EKKSREIKGK SEVGDCVEIK 480 IYEKGGWKKG LNGRKKNGEV KHEYGGNELS SHDGMEVGME KKERVRKKKM KKKQGAVRFL 540 KRMKQNCCES LKEEEEGDDE EERKKEGIKR EKVRGKRGVG RPAKKGERVK VKREEC

Sequence ? help Back to Top

Protein Sequence Length: 596 aa Download sequence

MVMQRQTNPK PWGTLGDLLL ASAVNRHGTA SWDSVAMELH NRFSQSPSSL TPQDCRNKFY  60
DLKRRFLSQN LHDSDSSSLL PMLDELRKIR VEELRRDVQR RDALIVSLEM KVKRLEEERD  120
PSFHEPHGGP DPDADADAVK TNLRPQNPTA SEDDSDNRKN IRSPNESNST SKKYEVRQNG  180
VVQENQIPES VKISKITGTG PPRTGDKPGK EWSFNGAAGE PEPEREKNSV AGGGYKERNW  240
RSSRRSQTAV GDSNEAWESV SESKQEGRDG AVSKQQSSDV QSSGSLSQRK RCRNSSGEEP  300
EVSPAKPKPK PKPKPSAVKS EALLKFLEII RSHRLGSAFE RRVRSQESDR YINLIRQHID  360
LRTIRARVVK GAYADSFHLF FRDLLLLFNN AIIFFHTTSP ENDAAVKLRA LVLEEMNDKA  420
RKPQPTVAKS KPTKPCTTAM VGCRKSDSVA AVWDVGGKKA EKKSREIKGK SEVGDCVEIK  480
IYEKGGWKKG LNGRKKNGEV KHEYGGNELS SHDGMEVGME KKERVRKKKM KKKQGAVRFL  540
KRMKQNCCES LKEEEEGDDE EERKKEGIKR EKVRGKRGVG RPAKKGERVK VKREEC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42150.1	2e-21	MYB_related family protein