PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022986269.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HD-ZIP
Protein Properties Length: 755aa    MW: 82740.8 Da    PI: 5.8442
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022986269.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox634.3e-2092148157
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 
                     +++ +++t++q++e+e++F+++++p+ ++r+eL+++l+L+  qVk+WFqN+R+++k+
  XP_022986269.1  92 KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELNLEPLQVKFWFQNKRTQMKN 148
                     688999************************************************995 PP
2START219.79.2e-692825021206
                     HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
           START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                     ela +a++el ++a+ +ep+W++        +n+de+l++f+++ +     ++ ea+r+s+vv+m++ +lve+l+d++ qW++ +     +a+tl
  XP_022986269.1 282 ELAVAAMEELTRMAQMGEPLWMTNLdgssHVLNEDEYLRTFPRGIGpkpagFKCEASRESAVVIMNHINLVEILMDVN-QWSTLFSgivsRAMTL 375
                     57899*******************99988899***********999********************************.**************** PP

                     EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS
           START  83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170
                     ev+s+g      galq+m++e+q++splvp R++++vRy++q+g+g+w++vd+S+d   + p    +vR++++pSg+li++++ng+skvtwvehv
  XP_022986269.1 376 EVLSTGvagnynGALQVMTSEFQVPSPLVPtRESYYVRYCKQHGDGKWAVVDISLDDLCPTP----GVRCRRRPSGCLIQEMPNGYSKVTWVEHV 466
                     ********************************************************999988....7**************************** PP

                     E--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 171 dlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     ++++r +h+l+r+lv+sg+a+gak+wv tl+rqce+
  XP_022986269.1 467 EVDDRGVHNLYRQLVSSGQAFGAKRWVTTLDRQCER 502
                     **********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 755 aa     Download sequence    
MPAGIMTQAR NMPSMIGRNG NNVGGFVSTS GLVLSQSSMM DGQLLPLDMP QNTSKSDLAR  60
IRDDDFDSAT KSDSDNNHEL VSGDDQDPRP KKKRYHRHTQ HQIQEMEAFF KECPHPDDKQ  120
RKELSRELNL EPLQVKFWFQ NKRTQMKNQH ERHENTQLRT ENEKLRADNM RYREALSNAS  180
CPNCGGPTAI GEMSFDEHHL RLENARLREE IDRISAIAAK YVGKPVVNYP LLSPPVPSRP  240
LELGMGNFGP QPGLGGDIHA STGDLIRSIS SPIEAEKPMI IELAVAAMEE LTRMAQMGEP  300
LWMTNLDGSS HVLNEDEYLR TFPRGIGPKP AGFKCEASRE SAVVIMNHIN LVEILMDVNQ  360
WSTLFSGIVS RAMTLEVLST GVAGNYNGAL QVMTSEFQVP SPLVPTRESY YVRYCKQHGD  420
GKWAVVDISL DDLCPTPGVR CRRRPSGCLI QEMPNGYSKV TWVEHVEVDD RGVHNLYRQL  480
VSSGQAFGAK RWVTTLDRQC ERLASAMATN ISTGDVGVIT NQEGRKSMLK LAERMVISFC  540
AGVSASTTHT WTTLSGTGAD DVRVMTRKSI DDPGRPPGIV LSAATSFWLP VPPKTIFDFL  600
RDENSRNEWD ILSNGGVVQE MAHIANGHDT GNCVSLLRVN STNSSQSNML ILQESCTDPT  660
VSFVIYAPVD IVAMNVVLNG GDPDYVALLP SGFAILPDGG GGEGVSGGSL LTVAFQILVD  720
SVPTAKLSLG SVATVNNLIA CTVERIKASL SCDAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05230.40.0HD-ZIP family protein