PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022986348.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 259aa    MW: 29288.5 Da    PI: 6.933
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022986348.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.72.7e-10101148555
                     HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +  rE+ RRd++N++f eL  +l +    + +K +K++iL  A++ + +Lq
  XP_022986348.1 101 KAWREKLRRDKLNERFLELSAVLEPG---KLPKTDKVAILSDAIRMMTDLQ 148
                     5569*********************9...9****************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MNSIDLLTQS DKLGGLSSES RENILFFFKQ SNKPCFISGD DEQLLACIHS NDQILLHEQK  60
RKQKTETKSL EVDCSYEDLD SLKEVGRKRL KAETSSASTS KAWREKLRRD KLNERFLELS  120
AVLEPGKLPK TDKVAILSDA IRMMTDLQCE IEKLKESEDD LKEKIKELKV EKNELRDEKQ  180
RLRAEKEKLE VQIKAVNARA AADIQHPPPT LSAAFTAQGQ AAGNKLMPFI GYPGIAMWQF  240
LPPATVDTSQ DHVLRPPVA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18692GRKRLKA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.11e-56bHLH family protein