PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022986370.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 229aa MW: 26291.1 Da PI: 5.9603

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022986370.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.3	1.3e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W+ eEde+l +v+++G+ W+ + g++R++k+c++rw++yl XP_022986370.1 14 RGAWSFEEDEKLRAYVQRYGPSKWRELPTLAGLTRCGKSCRLRWLNYL 61 89********************************************97 PP
2	Myb_DNA-binding	52.7	1e-16	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ T eE +l+ +++k++G++ W+tI ++++ gRt++++k++w+ + XP_022986370.1 67 RGNYTDEENDLICNLHKKHGNR-WSTIDAKLP-GRTDNEIKNHWNAH 111 899*****************.*****.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 229 aa Download sequence
MVRAPVVDKD GVRRGAWSFE EDEKLRAYVQ RYGPSKWREL PTLAGLTRCG KSCRLRWLNY 60 LRPGIKRGNY TDEENDLICN LHKKHGNRWS TIDAKLPGRT DNEIKNHWNA HLKKQQSSTQ 120 PKPKQLTSQV IEAKREDFTG YSSTTFGILE SSSLSQQTSS CDDNFATQNW GVEDHDRSGY 180 YEDFWTEPCV SDVLDGCLEF SADYGIGIFS PQHDASYDDN YIDLFCSLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G74080.1	1e-48	MYB family protein