PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022986562.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GATA
Protein Properties Length: 342aa    MW: 37278.3 Da    PI: 5.476
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022986562.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA53.24.2e-17261294134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     Cs+C +  Tp+WR gp+g ktLCnaCG++y++ +
  XP_022986562.1 261 CSHCLVQRTPQWRTGPNGAKTLCNACGVRYKSGR 294
                     *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    
MECLEAKALK SSFHWELAMK FAQPDDMVED DECSNGADLV AGEDFEVDEF LNFSHGDFEH  60
GSALRVEEDD DYEEFEKNRL SVSPYSNQSG GFPTAGEEGS KAVVAVELAI PNQNQNRNPT  120
SQGDALADLE WVSQFVDDSG SEYSCAAVSL NRSKPEKKLT GAVISCLPTS FPVKPRTKRP  180
RQFRQAKSNT SSLNQSSSSS SLSSSSGVSS AAPWFIFSDA GENVDSLNVS GEPTMKQRKK  240
SSSAAAVFQP VGPTGQIPRR CSHCLVQRTP QWRTGPNGAK TLCNACGVRY KSGRLFPEYR  300
PALSPTFCSG IHSNSHRKVL EMRKTKEVPE PASDLAPMVP SY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.25e-49GATA family protein