PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022986564.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GATA
Protein Properties Length: 331aa    MW: 35996.1 Da    PI: 5.2808
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022986564.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA53.24e-17250283134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     Cs+C +  Tp+WR gp+g ktLCnaCG++y++ +
  XP_022986564.1 250 CSHCLVQRTPQWRTGPNGAKTLCNACGVRYKSGR 283
                     *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MECLEAKALK SSFHWELAMK FAQPDDMVED DECSNGADLV AGEDFEVDEF LNFSHGDFEH  60
GSALRVEEDD DYEEFEKNRL SVSPYSNQSG GFPTAGEEGS KAVVAVELAI PGDALADLEW  120
VSQFVDDSGS EYSCAAVSLN RSKPEKKLTG AVISCLPTSF PVKPRTKRPR QFRQAKSNTS  180
SLNQSSSSSS LSSSSGVSSA APWFIFSDAG ENVDSLNVSG EPTMKQRKKS SSAAAVFQPV  240
GPTGQIPRRC SHCLVQRTPQ WRTGPNGAKT LCNACGVRYK SGRLFPEYRP ALSPTFCSGI  300
HSNSHRKVLE MRKTKEVPEP ASDLAPMVPS Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.22e-52GATA family protein