PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022986579.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 299aa    MW: 33812.1 Da    PI: 6.6225
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022986579.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding60.92.6e-191461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd +lvd+++++G g+W++ ++  g++R++k+c++rw +yl
   XP_022986579.1 14 KGPWTPEEDRILVDYIEKHGHGSWRALPKLAGLNRCGKSCRLRWTNYL 61
                     79********************************************97 PP
2Myb_DNA-binding52.11.5e-1667112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg+++ eE+++++ +++ lG++ W+ Ia++++ gRt++++k++w+++l
   XP_022986579.1  67 RGNFSNEEEQIIITLHASLGNK-WSIIASHLP-GRTDNEIKNFWNTHL 112
                      89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MSRASMLDEN GLKKGPWTPE EDRILVDYIE KHGHGSWRAL PKLAGLNRCG KSCRLRWTNY  60
LRPDIKRGNF SNEEEQIIIT LHASLGNKWS IIASHLPGRT DNEIKNFWNT HLKKKLLQMG  120
IDPVTHVPMP SDHHMNTFSN LHHLLSLSTA PWDSSLRLHT QAHLLQNVLQ ILNSPSSLAI  180
SNNLFNTQQI TNLTYNHPIG SFFQTFPSNI QPLQEPLSCD DYATTAPALG LENDCNRAES  240
FYDMSQCPNS LPDLIPASPE CSKIPTAIEN NWGDIMDDET SNSYWKHAIN QTPPPWSVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16770.25e-81MYB family protein