PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022986928.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 255aa    MW: 28157.4 Da    PI: 5.5349
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022986928.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.32.5e-20104154155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     ++++GVr++  +grW+AeIrdp    +r kr++lg+f+taeeAa+ +++a+++l g
  XP_022986928.1 104 KKFRGVRQRA-WGRWAAEIRDP----IRrKRIWLGTFDTAEEAAAVYDRAALELQG 154
                     59*****998.**********7....246************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MSAADMASLS GDRANCRWKP ATSGDSAKLE QKLVRIIVTD ADATNSSSED ELILGSRTAV  60
RRQVREITIN RYSVLDGSSA ESPVSEISKK RNPRSRRSKS SCRKKFRGVR QRAWGRWAAE  120
IRDPIRRKRI WLGTFDTAEE AAAVYDRAAL ELQGPNAITN FSSDGAVTTA ADGGNKQEDG  180
LNSPRTTAVW SPASVLHYDG VFTPKDEMLY CGEIDEFGFA MATASLPAAR RQYGGEEDFG  240
ELELDLDYFL VDVIY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
194105RSRRSKSSCRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.11e-26ERF family protein