PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022986958.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family LBD
Protein Properties Length: 149aa    MW: 17327.1 Da    PI: 9.7263
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022986958.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260130.38.1e-41191181100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +Ca+Ck+lrr+C+kdC++apyfp ++p kfa+vhk+FG+snv k+l++++ ++r ++++s+vyeA+ar+rdPvyG vg+i+ lq+q+ ql+ +la
  XP_022986958.1  19 PCASCKLLRRRCTKDCIFAPYFPPNDPLKFAIVHKIFGTSNVRKMLQKISVDQRANTVNSIVYEANARMRDPVYGWVGIISFLQNQVFQLEMQLA 113
                     7********************************************************************************************** PP

          DUF260  96 llkee 100
                     ++++e
  XP_022986958.1 114 EAQAE 118
                     99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    
MRRRLSTSRF REDYCVSSPC ASCKLLRRRC TKDCIFAPYF PPNDPLKFAI VHKIFGTSNV  60
RKMLQKISVD QRANTVNSIV YEANARMRDP VYGWVGIISF LQNQVFQLEM QLAEAQAEIL  120
SFQMQQPVAP MTFSTTRIDQ SYMFEYSSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30130.13e-62LBD family protein