PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022986989.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

YABBY

Protein Properties

Length: 177aa MW: 19393 Da PI: 9.2483

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022986989.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	203.3	9.5e-63	6	157	5	160
YABBY 5 ssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsse 99 ++e+vCyv+CnfCntilavsvP + +f++vtvrCGhC++llsvn+ ++q+l+ ++ + ++++ + ++++ s ++++s+s+ ++ XP_022986989.1 6 MAAERVCYVHCNFCNTILAVSVPCNNMFTLVTVRCGHCSNLLSVNMGASVQVLPPQDSQPGNKQQQVSGGDWSKDR--GSSSSSSSSSSKCTKIA 98 5789*************************************************997333333333333333333..33333333333333333 PP YABBY 100 klsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknW 160 +l ++ +++ r+pp irPPek+qrvPsaynrfikeeiqrika+nPdishreafs+aakn XP_022986989.1 99 SL-DSAERDQHRIPP-IRPPEKKQRVPSAYNRFIKEEIQRIKANNPDISHREAFSTAAKNV 157 33.344555566677.9****************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 177 aa Download sequence
MSLEMMAAER VCYVHCNFCN TILAVSVPCN NMFTLVTVRC GHCSNLLSVN MGASVQVLPP 60 QDSQPGNKQQ QVSGGDWSKD RGSSSSSSSS SSKCTKIASL DSAERDQHRI PPIRPPEKKQ 120 RVPSAYNRFI KEEIQRIKAN NPDISHREAF STAAKNVSSR TSCSCTKLRS ESLKLLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08465.1	2e-54	YABBY family protein