PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022986992.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

YABBY

Protein Properties

Length: 175aa MW: 19197.8 Da PI: 9.4988

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022986992.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	186.6	1.3e-57	6	155	5	160
YABBY 5 ssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsse 99 ++e+vCyv+CnfCntilavsvP + +f++vtvrCGhC++llsvn+ ++q+l+ ++ + ++++ + ++++ +s ++++s+s+ ++ XP_022986992.1 6 MAAERVCYVHCNFCNTILAVSVPCNNMFTLVTVRCGHCSNLLSVNMGASVQVLPPQDSQPGNKQQQVSGGDWSKDRGSSS--SSSSSSSKCTKIA 98 5789**************************************************973333333333333333333333..3333333333333 PP YABBY 100 klsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknW 160 +l ++ +++ r+pp ir +k+qrvPsaynrfikeeiqrika+nPdishreafs+aakn XP_022986992.1 99 SL-DSAERDQHRIPP-IR--QKKQRVPSAYNRFIKEEIQRIKANNPDISHREAFSTAAKNV 155 33.344455566666.44..6************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 175 aa Download sequence
MSLEMMAAER VCYVHCNFCN TILAVSVPCN NMFTLVTVRC GHCSNLLSVN MGASVQVLPP 60 QDSQPGNKQQ QVSGGDWSKD RGSSSSSSSS SSKCTKIASL DSAERDQHRI PPIRQKKQRV 120 PSAYNRFIKE EIQRIKANNP DISHREAFST AAKNVSSRTS CSCTKLRSES LKLLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08465.1	4e-50	YABBY family protein