PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022986993.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family YABBY
Protein Properties Length: 154aa    MW: 16791.9 Da    PI: 10.2614
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022986993.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY160.71.1e-49113423160
           YABBY  23 avsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsseklsenedeevprvppvir 117
                     +vsvP + +f++vtvrCGhC++llsvn+  ++q+l+ ++    + ++++   + ++++   s  ++++s+s+ ++  +l ++ +++  r+pp ir
  XP_022986993.1   1 MVSVPCNNMFTLVTVRCGHCSNLLSVNMGASVQVLPPQDSQPGNKQQQVSGGDWSKDR--GSSSSSSSSSSKCTKIASL-DSAERDQHRIPP-IR 91 
                     59***********************************997333333333333333333..3333333333333333333.344555566677.9* PP

           YABBY 118 PPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknW 160
                     PPek+qrvPsaynrfikeeiqrika+nPdishreafs+aakn 
  XP_022986993.1  92 PPEKKQRVPSAYNRFIKEEIQRIKANNPDISHREAFSTAAKNV 134
                     *****************************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 154 aa     Download sequence    
MVSVPCNNMF TLVTVRCGHC SNLLSVNMGA SVQVLPPQDS QPGNKQQQVS GGDWSKDRGS  60
SSSSSSSSSK CTKIASLDSA ERDQHRIPPI RPPEKKQRVP SAYNRFIKEE IQRIKANNPD  120
ISHREAFSTA AKNVSSRTSC SCTKLRSESL KLLG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08465.18e-42YABBY family protein