PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022987187.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 456aa MW: 49056.8 Da PI: 8.9916

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022987187.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.3	2.1e-30	169	228	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK+ kg+++pr+YYrCt a +Cpv+k+v+rs +d +++++tYeg+Hnh+ XP_022987187.1 169 MNDGCQWRKYGQKTAKGNPCPRAYYRCTGApSCPVRKQVQRSVDDISILITTYEGTHNHP 228 58************************998**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 456 aa Download sequence
MKRRKAEMRE VREENERLKK CLDETMKNYE TLKRQLHEMG QTREAKKSTQ TTAIAIHNHE 60 VEEMDQMVSL TLGRRLFNNI SSPTKSDPQN VGFLGVAETN VQTPSTHQTQ TPTDSEAKEE 120 ETTPIWPPGK SMKGLPAPPT GEDEVSRQNP PKKPRVSVRA RCDAPLVQMN DGCQWRKYGQ 180 KTAKGNPCPR AYYRCTGAPS CPVRKQVQRS VDDISILITT YEGTHNHPLP VSAMAMASTT 240 SAAASMLLSG PSSFATSATA TAVANLHGLN SYLSNNTNSK GFYLPNSSML SSSLNHPTIT 300 LDLTSNSLST NYPPKFPPDF GSSQYSFMPW NNSNSGYGYG NANQAGHLQF SRSSTPPPPL 360 SSPLLDTIAA ATKAITSDPN FHSALAAALS SIIGGGNGSK TVLPMASYVE EPQGNVCASS 420 LSSQQGSKGF EAAKSLSCST SKSPSSSPGD SRENGK

Sequence ? help Back to Top

Protein Sequence Length: 456 aa Download sequence

MKRRKAEMRE VREENERLKK CLDETMKNYE TLKRQLHEMG QTREAKKSTQ TTAIAIHNHE  60
VEEMDQMVSL TLGRRLFNNI SSPTKSDPQN VGFLGVAETN VQTPSTHQTQ TPTDSEAKEE  120
ETTPIWPPGK SMKGLPAPPT GEDEVSRQNP PKKPRVSVRA RCDAPLVQMN DGCQWRKYGQ  180
KTAKGNPCPR AYYRCTGAPS CPVRKQVQRS VDDISILITT YEGTHNHPLP VSAMAMASTT  240
SAAASMLLSG PSSFATSATA TAVANLHGLN SYLSNNTNSK GFYLPNSSML SSSLNHPTIT  300
LDLTSNSLST NYPPKFPPDF GSSQYSFMPW NNSNSGYGYG NANQAGHLQF SRSSTPPPPL  360
SSPLLDTIAA ATKAITSDPN FHSALAAALS SIIGGGNGSK TVLPMASYVE EPQGNVCASS  420
LSSQQGSKGF EAAKSLSCST SKSPSSSPGD SRENGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	1e-53	WRKY family protein