PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022987192.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TCP

Protein Properties

Length: 399aa MW: 42647.8 Da PI: 7.732

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022987192.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	130.1	2.2e-40	78	195	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg....... 88 ++k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++ + s +ss+s+ s + XP_022987192.1 78 PAKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSTMSVPsqlrsss 172 689******************************************************************99988888888888666665555555 PP TCP 89 ......................k 89 + XP_022987192.1 173 yynpnfslhqprrtlfpgfglsS 195 55555555555555555555542 PP

Sequence ? help Back to Top
Protein Sequence Length: 399 aa Download sequence
MEGGDELHHH HHHHHHHHNN HHRPTFPFQL LEKKDDDAAS CSTSPYPSLA ISPDPTTTTA 60 TATATTTSVA EPSSKKPPAK RTSTKDRHTK VDGRGRRIRM PALCAARVFQ LTRELGHKSD 120 GETIEWLLQQ AEPAVIAATG TGTIPANFTS LNISLRSSGS TMSVPSQLRS SSYYNPNFSL 180 HQPRRTLFPG FGLSSESSST ALLNFQSSNI GNSLLQAKPE LRDNTTSSLD LSDAAEEISI 240 GRKRRPSTEQ ELSSSSSQHQ MGGYLLQSSA GSIPASHGGG QVPANFWMLT NTNNQVMGGD 300 PIWTFPSVNN SGLYRGTMSS GLHFMNFPAP VALVPGQQFG SGAGGGNNSS SEGHLNILAG 360 LNPYRSVSTT GIMEQQGSGS HSHHGGGGDD RHDSTSHHS

Sequence ? help Back to Top

Protein Sequence Length: 399 aa Download sequence

MEGGDELHHH HHHHHHHHNN HHRPTFPFQL LEKKDDDAAS CSTSPYPSLA ISPDPTTTTA  60
TATATTTSVA EPSSKKPPAK RTSTKDRHTK VDGRGRRIRM PALCAARVFQ LTRELGHKSD  120
GETIEWLLQQ AEPAVIAATG TGTIPANFTS LNISLRSSGS TMSVPSQLRS SSYYNPNFSL  180
HQPRRTLFPG FGLSSESSST ALLNFQSSNI GNSLLQAKPE LRDNTTSSLD LSDAAEEISI  240
GRKRRPSTEQ ELSSSSSQHQ MGGYLLQSSA GSIPASHGGG QVPANFWMLT NTNNQVMGGD  300
PIWTFPSVNN SGLYRGTMSS GLHFMNFPAP VALVPGQQFG SGAGGGNNSS SEGHLNILAG  360
LNPYRSVSTT GIMEQQGSGS HSHHGGGGDD RHDSTSHHS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47620.1	1e-68	TCP family protein