PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022987258.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family LFY
Protein Properties Length: 387aa    MW: 43536.2 Da    PI: 6.853
Description LFY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022987258.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FLO_LFY622.29.4e-19013751386
         FLO_LFY   1 mdpeafsaslfkwdpraaaaapparlleeaavseapleaaaaaaarklreleelfkayGvryltvakiaelGftvstLvdmkdeelddlmkslse 95 
                     mdpea+sa+lfkwdpr ++   +  +   a +++     +    +  l +leelf+ayG+ry+t+akiaelGftvstL+dmkdeel+d+m+sls+
  XP_022987258.1   1 MDPEALSATLFKWDPRGMVGGGSG-ASLPAPLPP----YSLRPRELGLGGLEELFQAYGIRYYTAAKIAELGFTVSTLLDMKDEELEDMMNSLSH 90 
                     9***************98855443.333333333....34566777799********************************************** PP

         FLO_LFY  96 ifrldllvGeryGikaavraerrrleeeeaekkrrkllsedeet..aldalsqeglseepvqeekeaagsggeglgeaelvaaeekkseeekkka 188
                     ifr+dllvGeryGikaa+raerrr+++e + ++rr+lls+d++t  +ldalsqeglseepvq+eke +gsgg+g g++e+vaa+e +     kk+
  XP_022987258.1  91 IFRWDLLVGERYGIKAAIRAERRRVDDEIDPSRRRHLLSNDTTTnvVLDALSQEGLSEEPVQQEKEVVGSGGGG-GAWEAVAAAEMR-----KKQ 179
                     ***************************9999*******9999887799**********************9998.999999998432.....333 PP

         FLO_LFY 189 skkkqkrkkkkelkseededeeeeededeegsgedgeerqrehPfivtepgevargkknGLDYLfdLyeqCrefLlqvqkiakerGekcPtk.vt 282
                        ++++ +kk+++   +ed++e+e   ee+++ + +erqrehPfivtepgevargkknGLDYLf+LyeqCr+fL+qvq+iakerGekcP k vt
  XP_022987258.1 180 ---RRRNVSKKKQVIVMEEDNDETEGGGEEEENMEVSERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCRQFLIQVQNIAKERGEKCPNKqVT 271
                     ...2222222222344677777888888888889999*****************************************************987** PP

         FLO_LFY 283 nqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqgwdidavfnahprLsiWYvPtkLrqL 377
                     nqvfryakkagasyinkPkmrhYvhCYalhcLde+asn+lrr fkergenvGawrqacykplvaiaa qgwdida+fnahprL+iWYvPtkLrqL
  XP_022987258.1 272 NQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEDASNSLRRVFKERGENVGAWRQACYKPLVAIAAAQGWDIDAIFNAHPRLAIWYVPTKLRQL 366
                     *********************************************************************************************** PP

         FLO_LFY 378 Chlerskas 386
                     Ch+er++++
  XP_022987258.1 367 CHAERNSST 375
                     *****9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 387 aa     Download sequence    
MDPEALSATL FKWDPRGMVG GGSGASLPAP LPPYSLRPRE LGLGGLEELF QAYGIRYYTA  60
AKIAELGFTV STLLDMKDEE LEDMMNSLSH IFRWDLLVGE RYGIKAAIRA ERRRVDDEID  120
PSRRRHLLSN DTTTNVVLDA LSQEGLSEEP VQQEKEVVGS GGGGGAWEAV AAAEMRKKQR  180
RRNVSKKKQV IVMEEDNDET EGGGEEEENM EVSERQREHP FIVTEPGEVA RGKKNGLDYL  240
FHLYEQCRQF LIQVQNIAKE RGEKCPNKQV TNQVFRYAKK AGASYINKPK MRHYVHCYAL  300
HCLDEDASNS LRRVFKERGE NVGAWRQACY KPLVAIAAAQ GWDIDAIFNA HPRLAIWYVP  360
TKLRQLCHAE RNSSTASTSA AAAHLPF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1176182RKKQRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61850.11e-146LFY family protein