PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022987310.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family TCP
Protein Properties Length: 316aa    MW: 36686.2 Da    PI: 8.8512
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022987310.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP116.82.8e-36912362135
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..........ssssasec.eaesssssas.. 83 
                       k+drhski T +g+RdRR+Rls+++a++fF Lqd+LG+dk+skt+eWLl qa ++ik+l             +      + ++++ +s  +  
  XP_022987310.1  91 SSKRDRHSKIDTLRGPRDRRMRLSLPVAREFFGLQDMLGVDKASKTVEWLLFQARHEIKKLSCHdrggngdmrsP------SiSDGEVVSGIDet 179
                     579***********************************************************9977776544332......22333333333322 PP

             TCP  84 ..nsssg.......kaaksaakskksqksaasalnlakesrakarararertrekmriknk 135
                       n   +       ++a+++ +++ + +++++   lake r+kar+rar rt ek+ ++ k
  XP_022987310.1 180 ivN---SkinmkesRKATKK-EKRGRVARKTTYYPLAKECREKARERARARTIEKQLQSGK 236
                     222...03335432333333.455556666668**********************988766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MFLFNANDSI SFPDHSFLHF PPFHDDPTLH VLQQQPQNDI LLHQILLNEP PSNFISEFGS  60
ESTRIIVDEE HHHRVHQSLI MEQPIQRKQA SSKRDRHSKI DTLRGPRDRR MRLSLPVARE  120
FFGLQDMLGV DKASKTVEWL LFQARHEIKK LSCHDRGGNG DMRSPSISDG EVVSGIDETI  180
VNSKINMKES RKATKKEKRG RVARKTTYYP LAKECREKAR ERARARTIEK QLQSGKKTLS  240
SDQTNTNKQI EGRIQDVIRT SSSWSTQIDD QQLRTRNDET DDGLMMMGRW SQEHPFEDFQ  300
FFGKPWEPDN NHGICS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18550.24e-25TCP family protein